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Server Backup: 5 Best Practices

by Lauren Ballejos, IT Editorial Expert
reviewed by Stan Hunter, Technical Marketing Engineer
Server backup best practices blog banner
Server backup best practices blog banner

Key Points

  • Server backups are essential to protect growing volumes of business-critical data and minimize downtime.
  • Backup failures often stem from manual processes, limited storage, and slow performance, underscoring the need for automation and monitoring.
  • The 3-2-1 backup strategy improves data resilience by storing multiple copies across different media and locations.
  • Regular restore testing and backup monitoring ensure data integrity and faster recovery during incidents.
  • Automated, encrypted server backup solutions strengthen security, support compliance, and simplify backup management at scale.

There are plenty of disturbing statistics about data backup everywhere you look. According to Unitrends’ Unified Backup Survey Report 2025:

  • Despite 60% of organizations claiming they can recover from a downtime event within hours, in reality, only 35% actually can
  • Only 25% of organizations test disaster recovery once per year or less
  • 51% of organizations spend 10 or more hours per week managing backups

All these statistics make one fact crystal clear: data backup software and proper backup management are essential for every organization.

IT teams strive to successfully back up data wherever it is stored, from endpoint devices to servers. Back up and protect your data with ease by following these server backup best practices.

Whether it’s an IT team or an MSP, NinjaOne can provide you with a powerful backup solution to protect all your critical data.

→ Explore NinjaOne Backup features

Why server backup is important for IT

As the IT market continues to grow, the number of servers in use also increases. Per Fortune Business Insights, the global servers market value reached $145.15 billion in 2025 and is expected to reach $ 154.82 billion in 2026 and $ 270.75 billion by 2034, representing a CAGR of 7.20% over the given period. In short, more servers mean more data to protect and back up.

From minor setbacks to project failures, you never know precisely how data loss or theft can affect your organization, which is why it’s important to take proactive measures to prevent it.

Why server backup is critical for MSPs

MSPs provide IT services to many clients, so they are responsible for protecting clients’ data, and their own digital information. To ensure the security and accessibility of clients’ data, MSPs need an MSP-focused server backup solution that can regularly perform server backups.

Why server backup is critical for IT departments

IT departments rely on server backups just as much as MSPs do, but unlike MSPs, they do not deal with clients; they back up only their organization’s servers. IT departments are responsible for ensuring that every team within a company has access to the data they need to succeed. Additionally, they are responsible for the safety and security of data, especially confidential information. IT departments can use a reliable backup tool, such as NinjaOne’s remote server backup, to quickly and efficiently back up all servers within their organization.

Whether it’s an IT team or an MSP, NinjaOne can provide you with a powerful backup solution to protect all your critical data.

→ Explore NinjaOne Backup features

Backup challenges and how to overcome them

Although backing up data should be quick and easy, that isn’t always the case. Currently, there are four main backup challenges that IT teams face:

  • Backup space and resource requirements

All types of backups require space and resources; however, some backup methods require much less than others. For example, incremental backups require significantly less space and resources than a full server backup. To overcome space and resource constraints, IT professionals often switch between different backup types to back up data completely without conducting full backups all the time.

  • Damaged or incomplete backups

One of the worst feelings in the world is discovering that your valuable data has been damaged or corrupted during the backup process. To avoid this situation, IT teams implement disaster recovery testing. This testing ensures that information remains safe and whole throughout the data backup and recovery process.

  • Missing or failed backups

No one wants their backed-up data to go missing all of a sudden. The most likely cause of missing backups is forgetting to back up data and relying on manual work, or in other words, not setting an automated backup schedule. To prevent this, IT teams use a reliable backup solution with a scheduled backup and automatic alerts/notifications.

  • Slow backup speed

In the fast-paced world of IT, professionals don’t have time to sit and wait for their backups to load. Many factors can slow down the backup process, such as slow or unreliable internet connections or inadequate backup tools. Since many factors can slow a backup process, the best way to resolve this issue is to investigate and identify the contributing factors, then address them accordingly.

5 server backup best practices to follow

1) Implement a 3-2-1 backup strategy

One excellent way to protect your data is to diversify where your backup copies are stored. A 3-2-1 backup strategy involves creating at least three copies of data, storing two copies on different media, and storing one backup in an off-site location or in the cloud.

2) Test data restoration regularly

You never know when you’ll need to restore your backed-up data, so it’s essential to test your data restores regularly to ensure that they work properly. These tests will also give IT teams an idea of how long a restore will take, how much space it will require, and other important details, so that no one is caught off guard if a disaster occurs.

3) Automate backup processes

Manually backing up servers takes time, so it’s best to automate and schedule your backups rather than relying on manual efforts. With a server backup solution, you can schedule backups to ensure they run on time.

4) Monitor and manage backups

Sometimes, your backups don’t always go according to plan. Monitor and set up automatic alerts or notifications so you can catch failed or incomplete backups early before they cause issues.

5) Secure and encrypt data

The best way to protect your backed-up data is to secure and encrypt it. This is especially important for any IT teams that handle confidential information, such as healthcare information under HIPAA protection. Encryption will help protect against data theft, ransomware attacks, unauthorized access, and other serious threats.

Protect sensitive data with confidence across servers, endpoints, and SaaS

→ See what NinjaOne Backup can do

Try NinjaOne’s server backup solution

Want to make server backup as easy and fast as possible? Try NinjaOne server backup, which provides high-quality full-image backups for your servers. Ninja also offers flexible storage options, quick disaster recovery features, automated backup scheduling, and complete integration with RMM, patching, and other Ninja tools. Start simplifying your backup today with a free trial of NinjaOne.

FAQs

Server backup is the process of copying server data to secure storage for restoration after data loss, cyberattacks, hardware failure, or disasters.

Most organizations back up servers daily, but critical systems may require more frequent or continuous backups depending on business needs and recovery objectives.

The 3-2-1 backup strategy means keeping three copies of data, stored on two different media types, with one copy stored off-site or in the cloud.

Common challenges include failed or incomplete backups, limited storage space, slow backup speeds, and reliance on manual backup processes.

Backup failures can be reduced by automating backups, monitoring backup health, setting alerts, and regularly testing data restorations.

Testing backups ensures data can be successfully restored, verifies backup integrity, and helps organizations understand recovery time and resource requirements.

Server backups should be encrypted, access-controlled, and stored off-site or in immutable storage to protect against ransomware and unauthorized access.

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